Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs12787119 chr11:16505932 G/A 8.69E-9 119 40.67 52.22 7.15 KM Plot
THYM rs12796372 chr11:16487109 T/C 8.69E-9 119 40.67 52.22 7.15 KM Plot
THYM rs12796718 chr11:16496382 C/T 8.69E-9 119 40.67 52.22 7.15 KM Plot
THYM rs12816216 chr12:58347320 T/A 7.46E-13 118 42.25 27.3 6 KM Plot
THYM rs12822306 chr12:58339610 T/A 9.4E-13 117 42.25 25.6 6 KM Plot
THYM rs12829858 chr12:58344204 A/G 7.46E-13 118 42.25 27.3 6 KM Plot
THYM rs12907364 chr15:71817248 G/A 1.51E-6 116 39.75 47.63 12.52 KM Plot
THYM rs12920774 chr16:24830750 T/C 3.67E-6 118 48 28 31.37 KM Plot
THYM rs12924246 chr16:24844629 A/G 5.33E-6 117 49.4 29.23 31.37 KM Plot
THYM rs12927710 chr16:24790282 A/C 3.17E-6 119 46.6 28 31.37 KM Plot
THYM rs12930727 chr16:24838497 G/T 3.78E-5 119 19.03 38.13 46.6 KM Plot
THYM rs12999084 chr2:30837003 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs13001181 chr2:81517993 A/G 0.000283 119 36.77 59.63 27.68 KM Plot
THYM rs13047214 chr21:45455599 A/G 0.000107 119 38.58 50.65 28.43 KM Plot
THYM rs13048733 chr21:44087234 C/T 0.000105 117 40.67 49.4 28.43 KM Plot